Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.5□□□□□ -0.25
Nubp2Q9R061 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm8097-201ENSMUST00000117903 829 ntBASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm13418-201ENSMUST00000119097 944 ntBASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp2Q9R061 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp2Q9R061 BC037039-201ENSMUST00000192003 2205 ntBASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm25990-201ENSMUST00000102440 86 ntBASIC13.49□□□□□ -0.25
Nubp2Q9R061 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nubp2Q9R061 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.49□□□□□ -0.25
Nubp2Q9R061 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp2Q9R061 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms