Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Gm26308-201ENSMUST00000157768 69 ntBASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Gm27300-201ENSMUST00000184085 97 ntBASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Gm27335-201ENSMUST00000184758 97 ntBASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Gm13597-201ENSMUST00000121239 375 ntBASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom3Q9QXN0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom3Q9QXN0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom3Q9QXN0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom3Q9QXN0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom3Q9QXN0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom3Q9QXN0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Gm12008-201ENSMUST00000117791 755 ntBASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom3Q9QXN0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms