Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm44146-201ENSMUST00000203508 816 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 AC155266.1-201ENSMUST00000220762 904 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 CT009495.1-201ENSMUST00000224221 862 ntBASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh5Q9QUM7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC15.64■□□□□ 0.09
Msh5Q9QUM7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh5Q9QUM7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms