Protein–RNA interactions for Protein: Q9JKN6

Nova1, RNA-binding protein Nova-1, mousemouse

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nova1Q9JKN6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nova1Q9JKN6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nova1Q9JKN6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nova1Q9JKN6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gm12091-201ENSMUST00000146791 830 ntBASIC14.35□□□□□ -0.11
Nova1Q9JKN6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Mir6420-201ENSMUST00000185032 102 ntBASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nova1Q9JKN6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Haglr-201ENSMUST00000100000 2085 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm15483-201ENSMUST00000120338 456 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm12138-201ENSMUST00000122180 951 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm16026-204ENSMUST00000162652 683 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm27533-201ENSMUST00000183800 152 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nova1Q9JKN6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nova1Q9JKN6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nova1Q9JKN6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nova1Q9JKN6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nova1Q9JKN6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nova1Q9JKN6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Gm13829-201ENSMUST00000119600 138 ntBASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nova1Q9JKN6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms