Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Gm18958-201ENSMUST00000174258 762 ntBASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trem1Q9JKE2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Gm20049-201ENSMUST00000219950 730 ntBASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Carlr-201ENSMUST00000181515 2574 ntBASIC13.65□□□□□ -0.22
Trem1Q9JKE2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trem1Q9JKE2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Gm18666-201ENSMUST00000190039 958 ntBASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms