Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Gm8655-201ENSMUST00000221159 852 ntBASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.98□□□□□ -0.33
Rbfox1Q9JJ43 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Gm4459-201ENSMUST00000118750 468 ntBASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Gm15358-201ENSMUST00000119249 520 ntBASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rbfox1Q9JJ43 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rbfox1Q9JJ43 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rbfox1Q9JJ43 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms