Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Gm11355-201ENSMUST00000121120 306 ntBASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Gm21559-201ENSMUST00000220638 855 ntBASIC11.65□□□□□ -0.54
Cml3Q9JIY8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Gm8587-201ENSMUST00000076538 843 ntBASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cml3Q9JIY8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cml3Q9JIY8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cml3Q9JIY8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cml3Q9JIY8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cml3Q9JIY8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Mir6404-201ENSMUST00000183699 94 ntBASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.64□□□□□ -0.55
Cml3Q9JIY8 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cml3Q9JIY8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cml3Q9JIY8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms