Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Gm13597-201ENSMUST00000121239 375 ntBASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Mir1895-201ENSMUST00000122615 79 ntBASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Gm27301-201ENSMUST00000184012 127 ntBASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Gm17968-201ENSMUST00000194902 784 ntBASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Ripk4Q9ERK0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Ripk4Q9ERK0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ripk4Q9ERK0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ripk4Q9ERK0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Gm27494-201ENSMUST00000184735 189 ntBASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ripk4Q9ERK0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ripk4Q9ERK0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ripk4Q9ERK0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ripk4Q9ERK0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Ripk4Q9ERK0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.48■□□□□ 0.55
Ripk4Q9ERK0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.48■□□□□ 0.55
Ripk4Q9ERK0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms