Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubb3Q9ERD7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm8655-201ENSMUST00000221159 852 ntBASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tubb3Q9ERD7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Gm7230-201ENSMUST00000173026 815 ntBASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tubb3Q9ERD7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tubb3Q9ERD7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms