Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Upf1Q9EPU0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf1Q9EPU0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf1Q9EPU0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Gm22902-201ENSMUST00000158488 302 ntBASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Gm45880-201ENSMUST00000213041 853 ntBASIC17.07■□□□□ 0.32
Upf1Q9EPU0 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf1Q9EPU0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gm2495-201ENSMUST00000191160 466 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gm5279-201ENSMUST00000199575 745 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gm7287-201ENSMUST00000205267 602 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gm8463-201ENSMUST00000208573 613 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Nsd1-205ENSMUST00000224693 852 ntBASIC17.06■□□□□ 0.32
Upf1Q9EPU0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms