Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Grk6-207ENSMUST00000225925 2769 ntBASIC14.43□□□□□ -0.1
Upk1aQ9D132 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.43□□□□□ -0.1
Upk1aQ9D132 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk1aQ9D132 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm13312-201ENSMUST00000119631 718 ntBASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm25016-201ENSMUST00000158399 131 ntBASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm23634-201ENSMUST00000175071 91 ntBASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.41□□□□□ -0.1
Upk1aQ9D132 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.41□□□□□ -0.1
Upk1aQ9D132 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk1aQ9D132 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms