Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.08□□□□□ -0.15
Trim13Q9CYB0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim13Q9CYB0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim13Q9CYB0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Gm7367-201ENSMUST00000057611 492 ntBASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim13Q9CYB0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim13Q9CYB0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms