Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.19■□□□□ 0.34
Chd1lQ9CXF7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Gm11355-201ENSMUST00000121120 306 ntBASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Gm25406-201ENSMUST00000157599 105 ntBASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1lQ9CXF7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Grk6-207ENSMUST00000225925 2769 ntBASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1lQ9CXF7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Gm18959-201ENSMUST00000208954 655 ntBASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1lQ9CXF7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms