Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gm15372-201ENSMUST00000120729 834 ntBASIC17.91■□□□□ 0.46
Smc3Q9CW03 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gm8655-201ENSMUST00000221159 852 ntBASIC17.91■□□□□ 0.46
Smc3Q9CW03 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Gm33142-201ENSMUST00000193913 867 ntBASIC17.9■□□□□ 0.46
Smc3Q9CW03 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc3Q9CW03 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smc3Q9CW03 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.89■□□□□ 0.46
Smc3Q9CW03 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Smc3Q9CW03 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smc3Q9CW03 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.89■□□□□ 0.45
Smc3Q9CW03 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.89■□□□□ 0.45
Smc3Q9CW03 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc3Q9CW03 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.88■□□□□ 0.45
Smc3Q9CW03 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Gm27357-201ENSMUST00000183754 135 ntBASIC17.88■□□□□ 0.45
Smc3Q9CW03 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.88■□□□□ 0.45
Smc3Q9CW03 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc3Q9CW03 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc3Q9CW03 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms