Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim11Q99PQ2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
Trim11Q99PQ2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm43347-201ENSMUST00000200226 580 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Birc2-201ENSMUST00000054878 378 ntBASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim11Q99PQ2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim11Q99PQ2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim11Q99PQ2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim11Q99PQ2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim11Q99PQ2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms