Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.69■□□□□ 0.58
Trim34aQ99PP6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim34aQ99PP6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim34aQ99PP6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34aQ99PP6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Gm27618-201ENSMUST00000183671 60 ntBASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Mir6977-201ENSMUST00000184960 64 ntBASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34aQ99PP6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms