Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm10819-201ENSMUST00000099988 561 ntBASIC14.93□□□□□ -0.02
Trim8Q99PJ2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim8Q99PJ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim8Q99PJ2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms