Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm8344-201ENSMUST00000119813 856 ntBASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm9824-201ENSMUST00000178707 561 ntBASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col25a1Q99MQ5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm26461-201ENSMUST00000175064 290 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm42693-201ENSMUST00000196779 631 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Gm45668-201ENSMUST00000211271 493 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col25a1Q99MQ5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col25a1Q99MQ5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gm13392-201ENSMUST00000117708 150 ntBASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gm11918-201ENSMUST00000121660 179 ntBASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms