Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nck1Q99M51 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nck1Q99M51 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nck1Q99M51 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nck1Q99M51 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.52□□□□□ -0.09
Nck1Q99M51 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Nck1Q99M51 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.52□□□□□ -0.09
Nck1Q99M51 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nck1Q99M51 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.51□□□□□ -0.09
Nck1Q99M51 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Gm15565-201ENSMUST00000118890 427 ntBASIC14.51□□□□□ -0.09
Nck1Q99M51 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.51□□□□□ -0.09
Nck1Q99M51 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Nck1Q99M51 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nck1Q99M51 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nck1Q99M51 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.5□□□□□ -0.09
Nck1Q99M51 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.5□□□□□ -0.09
Nck1Q99M51 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.5□□□□□ -0.09
Nck1Q99M51 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nck1Q99M51 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nck1Q99M51 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nck1Q99M51 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.5□□□□□ -0.09
Nck1Q99M51 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms