Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
USP9XQ93008 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
USP9XQ93008 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.69■□□□□ 0.1
USP9XQ93008 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.69■□□□□ 0.1
USP9XQ93008 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 PKD1P6-201ENST00000343738 4769 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 SDHAP2-201ENST00000455183 2001 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.69■□□□□ 0.1
USP9XQ93008 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USP9XQ93008 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 ADH5P3-201ENST00000433842 1137 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.69■□□□□ 0.1
USP9XQ93008 AP005018.1-201ENST00000525475 301 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 OR7E47P-204ENST00000575924 449 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 AL589182.2-201ENST00000619332 1049 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 AL157384.1-201ENST00000445995 2473 ntBASIC15.68■□□□□ 0.1
USP9XQ93008 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.68■□□□□ 0.1
USP9XQ93008 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
USP9XQ93008 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.68■□□□□ 0.1
USP9XQ93008 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.68■□□□□ 0.1
USP9XQ93008 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.68■□□□□ 0.1
USP9XQ93008 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.68■□□□□ 0.1
USP9XQ93008 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.68■□□□□ 0.1
USP9XQ93008 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.68■□□□□ 0.1
USP9XQ93008 AC010654.1-201ENST00000615722 808 ntBASIC15.68■□□□□ 0.1
USP9XQ93008 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
USP9XQ93008 LINC00628-201ENST00000628516 1289 ntBASIC15.68■□□□□ 0.1
USP9XQ93008 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP9XQ93008 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
USP9XQ93008 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP9XQ93008 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
USP9XQ93008 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.68■□□□□ 0.1
USP9XQ93008 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP9XQ93008 AC004835.2-201ENST00000603762 682 ntBASIC15.68■□□□□ 0.1
USP9XQ93008 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.67■□□□□ 0.1
USP9XQ93008 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP9XQ93008 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP9XQ93008 CRB3P1-201ENST00000449338 276 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 AC093520.2-201ENST00000561830 333 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP9XQ93008 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP9XQ93008 MIR149-201ENST00000384879 89 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 AC236430.1-201ENST00000402231 743 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP9XQ93008 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 TSPY16P-201ENST00000449843 468 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.67■□□□□ 0.1
USP9XQ93008 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.67■□□□□ 0.1
USP9XQ93008 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.67■□□□□ 0.1
USP9XQ93008 AC125437.2-201ENST00000625180 2167 ntBASIC15.67■□□□□ 0.1
USP9XQ93008 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 AC012676.1-201ENST00000574705 1949 ntBASIC15.66■□□□□ 0.1
USP9XQ93008 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 KRT18P65-201ENST00000439811 1286 ntBASIC15.66■□□□□ 0.1
USP9XQ93008 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.66■□□□□ 0.1
USP9XQ93008 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.66■□□□□ 0.1
USP9XQ93008 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 FEM1AP3-201ENST00000403722 1741 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms