Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm2495-201ENSMUST00000191160 466 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm33320-201ENSMUST00000192232 530 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Mir7654-201ENSMUST00000185082 70 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm8463-201ENSMUST00000208573 613 ntBASIC17.84■□□□□ 0.45
StrcQ8VIM6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
StrcQ8VIM6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
StrcQ8VIM6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
StrcQ8VIM6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
StrcQ8VIM6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
StrcQ8VIM6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Gm28911-201ENSMUST00000188837 117 ntBASIC17.83■□□□□ 0.44
StrcQ8VIM6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Gm5279-201ENSMUST00000199575 745 ntBASIC17.83■□□□□ 0.44
StrcQ8VIM6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.83■□□□□ 0.44
StrcQ8VIM6 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.83■□□□□ 0.44
StrcQ8VIM6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
StrcQ8VIM6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.82■□□□□ 0.44
StrcQ8VIM6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
StrcQ8VIM6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms