Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.75■□□□□ 0.11
Trim60Q8VI40 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.75■□□□□ 0.11
Trim60Q8VI40 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.75■□□□□ 0.11
Trim60Q8VI40 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.75■□□□□ 0.11
Trim60Q8VI40 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim60Q8VI40 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Gm27867-201ENSMUST00000184778 125 ntBASIC15.74■□□□□ 0.11
Trim60Q8VI40 Gm27704-201ENSMUST00000185094 107 ntBASIC15.74■□□□□ 0.11
Trim60Q8VI40 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim60Q8VI40 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim60Q8VI40 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.73■□□□□ 0.11
Trim60Q8VI40 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.72■□□□□ 0.11
Trim60Q8VI40 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Gm15358-201ENSMUST00000119249 520 ntBASIC15.72■□□□□ 0.11
Trim60Q8VI40 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Gm7506-201ENSMUST00000207758 815 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms