Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm24694-201ENSMUST00000180054 110 ntBASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm27663-201ENSMUST00000184839 110 ntBASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm12742-201ENSMUST00000117326 410 ntBASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cspg4Q8VHY0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.02□□□□□ -0.32
Cspg4Q8VHY0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Gm11918-201ENSMUST00000121660 179 ntBASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Gm38225-201ENSMUST00000194001 393 ntBASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Gm45841-201ENSMUST00000207700 164 ntBASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cspg4Q8VHY0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms