Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Gm45612-201ENSMUST00000211320 160 ntBASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm11745-201ENSMUST00000121669 448 ntBASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm8396-201ENSMUST00000057361 823 ntBASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdhr1Q8VHP6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdhr1Q8VHP6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Cdhr1Q8VHP6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Gm16198-201ENSMUST00000118766 670 ntBASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Gm13365-201ENSMUST00000121188 973 ntBASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdhr1Q8VHP6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms