Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4aQ8VEJ9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4aQ8VEJ9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm25406-201ENSMUST00000157599 105 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm44454-201ENSMUST00000198541 138 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vps4aQ8VEJ9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.75□□□□□ -0.05
Vps4aQ8VEJ9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms