Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndc1Q8VCB1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndc1Q8VCB1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gm23935-201ENSMUST00000102303 57 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gm24270-201ENSMUST00000102326 57 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gm24245-201ENSMUST00000157318 57 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndc1Q8VCB1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.36□□□□□ -0.11
Ndc1Q8VCB1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndc1Q8VCB1 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Gm25925-201ENSMUST00000158314 306 ntBASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms