Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Gm27300-201ENSMUST00000184085 97 ntBASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Gm27335-201ENSMUST00000184758 97 ntBASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpap2Q8VC34 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpap2Q8VC34 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.65■□□□□ 0.26
Rpap2Q8VC34 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpap2Q8VC34 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpap2Q8VC34 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpap2Q8VC34 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rpap2Q8VC34 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms