Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm8825-201ENSMUST00000182565 998 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm4518-201ENSMUST00000182638 718 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup35Q8R4R6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Gm43799-201ENSMUST00000201845 579 ntBASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nup35Q8R4R6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms