Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm37935-201ENSMUST00000192012 982 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm2213-201ENSMUST00000197485 688 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chrna3Q8R4G9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.92□□□□□ -0.02
Chrna3Q8R4G9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms