Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdt1Q8R4E9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdt1Q8R4E9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Cdt1Q8R4E9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Chchd1-203ENSMUST00000224633 557 ntBASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdt1Q8R4E9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cdt1Q8R4E9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdt1Q8R4E9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Cdt1Q8R4E9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdt1Q8R4E9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms