Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm15039-201ENSMUST00000118914 875 ntBASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc58Q8R3Q6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gm37055-201ENSMUST00000191866 133 ntBASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gm18959-201ENSMUST00000208954 655 ntBASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc58Q8R3Q6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc58Q8R3Q6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc58Q8R3Q6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms