Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 BC037039-201ENSMUST00000192003 2205 ntBASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim29Q8R2Q0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim29Q8R2Q0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim29Q8R2Q0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim29Q8R2Q0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm7230-201ENSMUST00000173026 815 ntBASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gm37153-201ENSMUST00000193637 231 ntBASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim29Q8R2Q0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Gm15173-201ENSMUST00000122049 433 ntBASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Gm18489-201ENSMUST00000172565 551 ntBASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms