Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Gm15693-201ENSMUST00000120470 637 ntBASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.39■□□□□ 0.7
Chmp7Q8R1T1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp7Q8R1T1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Gm6415-201ENSMUST00000118488 348 ntBASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp7Q8R1T1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp7Q8R1T1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms