Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Gm16198-201ENSMUST00000118766 670 ntBASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Celf4-206ENSMUST00000224553 1729 ntBASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpp40Q8R1F9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpp40Q8R1F9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Gm2213-201ENSMUST00000197485 688 ntBASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Rpp40Q8R1F9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gm27301-201ENSMUST00000184012 127 ntBASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpp40Q8R1F9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms