Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atf7Q8R0S1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atf7Q8R0S1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Gm7787-201ENSMUST00000216858 688 ntBASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Atf7Q8R0S1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Gm45167-201ENSMUST00000208007 322 ntBASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Atf7Q8R0S1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf7Q8R0S1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf7Q8R0S1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms