Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Asic1-205ENSMUST00000228185 1818 ntBASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3a1Q8K4Z5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm14140-201ENSMUST00000119999 995 ntBASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm18206-201ENSMUST00000207027 926 ntBASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm5364-201ENSMUST00000216789 889 ntBASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3a1Q8K4Z5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Sybu-209ENSMUST00000228639 4113 ntBASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Gm6443-201ENSMUST00000203599 874 ntBASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3a1Q8K4Z5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sf3a1Q8K4Z5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sf3a1Q8K4Z5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms