Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Mir7684-201ENSMUST00000183858 60 ntBASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alms1Q8K4E0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.8□□□□□ -0.04
Alms1Q8K4E0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gm12490-201ENSMUST00000120255 560 ntBASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.8□□□□□ -0.04
Alms1Q8K4E0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alms1Q8K4E0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Gm12138-201ENSMUST00000122180 951 ntBASIC14.79□□□□□ -0.04
Alms1Q8K4E0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alms1Q8K4E0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alms1Q8K4E0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms