Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.37□□□□□ -0.11
Clrn1Q8K445 Gm5682-201ENSMUST00000173402 505 ntBASIC14.37□□□□□ -0.11
Clrn1Q8K445 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.37□□□□□ -0.11
Clrn1Q8K445 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn1Q8K445 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.36□□□□□ -0.11
Clrn1Q8K445 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn1Q8K445 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.35□□□□□ -0.11
Clrn1Q8K445 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.35□□□□□ -0.11
Clrn1Q8K445 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Mzt1-203ENSMUST00000227948 952 ntBASIC14.35□□□□□ -0.11
Clrn1Q8K445 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms