Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.59□□□□□ -0.87
Cystm1Q8K353 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Gm11839-201ENSMUST00000120647 1953 ntBASIC9.59□□□□□ -0.87
Cystm1Q8K353 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC9.59□□□□□ -0.87
Cystm1Q8K353 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.59□□□□□ -0.87
Cystm1Q8K353 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.59□□□□□ -0.87
Cystm1Q8K353 AC166574.6-201ENSMUST00000227889 1806 ntBASIC9.59□□□□□ -0.88
Cystm1Q8K353 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.58□□□□□ -0.88
Cystm1Q8K353 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm11355-201ENSMUST00000121120 306 ntBASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm4217-201ENSMUST00000182243 1002 ntBASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm7213-201ENSMUST00000215977 950 ntBASIC9.58□□□□□ -0.88
Cystm1Q8K353 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gm7367-201ENSMUST00000057611 492 ntBASIC9.58□□□□□ -0.88
Cystm1Q8K353 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Cystm1Q8K353 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cystm1Q8K353 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms