Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Gm27646-201ENSMUST00000183989 110 ntBASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cchcr1Q8K2I2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cchcr1Q8K2I2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cchcr1Q8K2I2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms