Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Asic1-205ENSMUST00000228185 1818 ntBASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Mir5126-201ENSMUST00000175513 77 ntBASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Gm2651-201ENSMUST00000203560 838 ntBASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfwd3Q8CIK8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Gm12350-201ENSMUST00000121208 462 ntBASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Gm37153-201ENSMUST00000193637 231 ntBASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfwd3Q8CIK8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms