Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Rpph1-201ENSMUST00000175096 319 ntBASIC18.7■□□□□ 0.58
Smc4Q8CG47 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.7■□□□□ 0.58
Smc4Q8CG47 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.7■□□□□ 0.58
Smc4Q8CG47 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Gm9385-201ENSMUST00000117563 472 ntBASIC18.69■□□□□ 0.58
Smc4Q8CG47 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc4Q8CG47 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.69■□□□□ 0.58
Smc4Q8CG47 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Dancr-204ENSMUST00000132389 2347 ntBASIC18.69■□□□□ 0.58
Smc4Q8CG47 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc4Q8CG47 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Rprl2-201ENSMUST00000157150 290 ntBASIC18.68■□□□□ 0.58
Smc4Q8CG47 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc4Q8CG47 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc4Q8CG47 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms