Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nup88Q8CEC0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Gm27628-201ENSMUST00000184911 107 ntBASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.92■□□□□ 0.46
Nup88Q8CEC0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nup88Q8CEC0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Gm14140-201ENSMUST00000119999 995 ntBASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms