Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Alx1Q8C8B0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Gm17271-201ENSMUST00000165535 355 ntBASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Alx1Q8C8B0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Gm37935-201ENSMUST00000192012 982 ntBASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alx1Q8C8B0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx1Q8C8B0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms