Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
Uba3Q8C878 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.02■□□□□ 0.16
Uba3Q8C878 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Uba3Q8C878 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.02■□□□□ 0.16
Uba3Q8C878 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.02■□□□□ 0.16
Uba3Q8C878 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Uba3Q8C878 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Uba3Q8C878 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Uba3Q8C878 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Uba3Q8C878 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Uba3Q8C878 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Uba3Q8C878 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.02■□□□□ 0.15
Uba3Q8C878 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Uba3Q8C878 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Uba3Q8C878 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Uba3Q8C878 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Uba3Q8C878 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Uba3Q8C878 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.01■□□□□ 0.15
Uba3Q8C878 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Uba3Q8C878 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Uba3Q8C878 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Gm11873-201ENSMUST00000117877 1304 ntBASIC16■□□□□ 0.15
Uba3Q8C878 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Uba3Q8C878 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16■□□□□ 0.15
Uba3Q8C878 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Gm14140-201ENSMUST00000119999 995 ntBASIC16■□□□□ 0.15
Uba3Q8C878 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16■□□□□ 0.15
Uba3Q8C878 Gm18246-201ENSMUST00000221023 728 ntBASIC16■□□□□ 0.15
Uba3Q8C878 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16■□□□□ 0.15
Uba3Q8C878 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16■□□□□ 0.15
Uba3Q8C878 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Uba3Q8C878 Gm11839-201ENSMUST00000120647 1953 ntBASIC16■□□□□ 0.15
Uba3Q8C878 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16■□□□□ 0.15
Uba3Q8C878 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Uba3Q8C878 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.99■□□□□ 0.15
Uba3Q8C878 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Gm6443-201ENSMUST00000203599 874 ntBASIC15.99■□□□□ 0.15
Uba3Q8C878 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.99■□□□□ 0.15
Uba3Q8C878 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Uba3Q8C878 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uba3Q8C878 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms