Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.06■□□□□ 0
Aph1bQ8C7N7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.06■□□□□ 0
Aph1bQ8C7N7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.06■□□□□ 0
Aph1bQ8C7N7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.06■□□□□ 0
Aph1bQ8C7N7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Carlr-201ENSMUST00000181515 2574 ntBASIC15.06■□□□□ 0
Aph1bQ8C7N7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Aph1bQ8C7N7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.06■□□□□ 0
Aph1bQ8C7N7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Aph1bQ8C7N7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Aph1bQ8C7N7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.04■□□□□ -0
Aph1bQ8C7N7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.04■□□□□ -0
Aph1bQ8C7N7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms