Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gm7787-201ENSMUST00000216858 688 ntBASIC16.77■□□□□ 0.28
Trim9Q8C7M3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim9Q8C7M3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim9Q8C7M3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Gm13036-201ENSMUST00000117799 748 ntBASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim9Q8C7M3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Mir5131-201ENSMUST00000175426 93 ntBASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim9Q8C7M3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim9Q8C7M3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms