Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf3Q8C120 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf3Q8C120 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Gm7230-201ENSMUST00000173026 815 ntBASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Gm28659-201ENSMUST00000188013 759 ntBASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf3Q8C120 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.83■□□□□ 0.13
Sh3rf3Q8C120 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Gm6550-201ENSMUST00000187574 993 ntBASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3rf3Q8C120 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms