Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trub1Q8C0D0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trub1Q8C0D0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Gm45167-201ENSMUST00000208007 322 ntBASIC15.67■□□□□ 0.1
Trub1Q8C0D0 AV026068-213ENSMUST00000223675 1171 ntBASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
Trub1Q8C0D0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trub1Q8C0D0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms