Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Auts2-212ENSMUST00000178555 309 ntBASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Gm13616-201ENSMUST00000120600 222 ntBASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Gm43125-201ENSMUST00000201724 730 ntBASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Gm18057-201ENSMUST00000208220 503 ntBASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf2Q8BZT2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf2Q8BZT2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms